Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
238 285

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:11,02:11 52:01,52:01 12:02,12:02 None None 05:02,05:02 15:02,16:05
RPKM HLA_A rpkm 27.99 ; HLA_B rpkm 7.88 ; HLA_C rpkm 19.73 ; HLA_DQB1 rpkm 0.11 ; HLA_DRB1 rpkm 0.26
Note In HLA_DRB1 15:02 and 16:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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