Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns, Astrocytoma_grade_iv
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
217 496

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,33:03 39:01,39:01 12:03,12:03 None None None 11:11,11:11
RPKM HLA_C rpkm 84.03 ; HLA_DRB1 rpkm 0.13 ; HLA_A rpkm 72.46 ; HLA_B rpkm 50.4
Note In HLA_DRB1 11:11 , HLA_B 39:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns, Astrocytoma_grade_iv
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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