Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
284 577

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,02:01 14:01,27:05 08:02,08:02 06:01,02:01 None 04:02,02:01 08:01,07:01
RPKM HLA_DRB1 rpkm 26.5 ; HLA_DQA1 rpkm 3.32 ; HLA_B rpkm 202.53 ; HLA_C rpkm 214.43 ; HLA_DQB1 rpkm 13.11 ; HLA_A rpkm 271.46
Note In HLA_DRB1 08:01 , HLA_B 14:01 , HLA_C 08:02 , HLA_DQB1 04:02 and 02:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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