Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Parietal_lobe
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
192 458

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,03:01 08:01,57:01 07:01,06:02 None None 03:04,03:04 04:03,04:03
RPKM HLA_A rpkm 82.2 ; HLA_C rpkm 43.92 ; HLA_DQB1 rpkm 0.08 ; HLA_B rpkm 17.68 ; HLA_DRB1 rpkm 0.04
Note In HLA_C 07:01 , HLA_DQB1 03:04 , HLA_DRB1 04:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Parietal_lobe
Primary Histology Glioma Histology Subtype Astrocytoma_grade_iv
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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