Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
4295 6349

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:01 08:01,08:01 07:01,04:01 None None None None
RPKM HLA_A rpkm 119.56 ; HLA_B rpkm 4.24 ; HLA_C rpkm 28.75
Note In HLA_A 02:01 , HLA_C 07:01 and 04:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Large_intestine Site Subtype Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background