Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Unknown Age None
Ethnicity Caucasian Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
430 961

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,35:01 07:01,04:01 None None 03:09,05:03 11:30,11:30
RPKM HLA_A rpkm 27.64 ; HLA_B rpkm 3.52 ; HLA_C rpkm 16.16 ; HLA_DQB1 rpkm 0.47 ; HLA_DRB1 rpkm 0.03
Note In HLA_B 35:01 , HLA_C 07:01 , HLA_DQB1 03:09 and 05:03 , HLA_DRB1 11:30. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_carcinoma
Gender Unknown Age None
Ethnicity Caucasian Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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