Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Breast

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
112 126

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,03:01 40:01,07:02 03:04,07:02 None None 06:02,06:02 None
RPKM HLA_A rpkm 260.85 ; HLA_B rpkm 162.98 ; HLA_C rpkm 110.42 ; HLA_DQB1 rpkm 2.71
Note In HLA_B 40:01 , HLA_DQB1 06:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ductal_carcinoma
Gender Female Age None
Ethnicity Caucasian Tumour Source Breast
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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