Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
2299 8327

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
66:01,01:02 58:01,58:01 06:02,03:02 01:03,01:03 None 06:13,06:13 13:01,03:17
RPKM HLA_DQB1 rpkm 43.41 ; HLA_DQA1 rpkm 81.92 ; HLA_DRB1 rpkm 154.24 ; HLA_B rpkm 276.53 ; HLA_C rpkm 150.17 ; HLA_A rpkm 74.78
Note In HLA_DQB1 06:13 , HLA_DQA1 01:03 , HLA_DRB1 13:01 and 03:17 , HLA_A 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Male Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background