Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Head_neck
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
287 307

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
29:02,31:04 47:03,57:03 07:01,07:01 05:01,01:02 None 06:09,03:01 11:02,13:02
RPKM HLA_A rpkm 91.42 ; HLA_B rpkm 116.19 ; HLA_C rpkm 93.75 ; HLA_DQA1 rpkm 103.96 ; HLA_DQB1 rpkm 42.7 ; HLA_DRB1 rpkm 166.5
Note In HLA_A 31:04 , HLA_B 57:03 , HLA_C 07:01 , HLA_DQB1 06:09 , HLA_DRB1 11:02 and 13:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Head_neck
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background