Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Female Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Ovary

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
673 1599

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
29:02,31:04 57:03,47:03 07:01,07:01 05:01,01:02 None 06:04,03:01 13:01,11:02
RPKM HLA_A rpkm 366.48 ; HLA_B rpkm 405.15 ; HLA_C rpkm 233.98 ; HLA_DQA1 rpkm 204.64 ; HLA_DQB1 rpkm 57.83 ; HLA_DRB1 rpkm 404.47
Note In HLA_A 31:04 , HLA_B 57:03 , HLA_C 07:01 , HLA_DQA1 05:01 , HLA_DQB1 06:04 , HLA_DRB1 13:01 and 11:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Burkitt_lymphoma
Gender Female Age Not Available
Ethnicity Black, African_american Tumour Source Primary, Ovary
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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