Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_adenocarcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Metastasis, Liver

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
465 1063

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,03:01 40:01,44:02 05:01,03:04 None None 05:03,06:13 15:01,15:01
RPKM HLA_DRB1 rpkm 0.06 ; HLA_B rpkm 19.95 ; HLA_A rpkm 95.93 ; HLA_DQB1 rpkm 0.81 ; HLA_C rpkm 13.69
Note In HLA_B 40:01 , HLA_DQB1 06:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Small_cell_adenocarcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Metastasis, Liver
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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