Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Mucinous_carcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Omentum

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1216 2804

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,02:01 40:01,35:01 04:01,03:04 None None 06:04,05:01 01:01,11:09
RPKM HLA_A rpkm 92.55 ; HLA_B rpkm 76.18 ; HLA_C rpkm 78.11 ; HLA_DQB1 rpkm 2.04 ; HLA_DRB1 rpkm 0.53
Note In HLA_A 02:01 , HLA_B 35:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Ovary Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Mucinous_carcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Omentum
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background