Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Thyroid Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Follicular_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
577 690

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
03:01,03:01 07:02,07:02 07:02,07:02 None None 06:04,06:04 03:08,11:30
RPKM HLA_B rpkm 37.31 ; HLA_C rpkm 102.22 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.09 ; HLA_A rpkm 129.35
Note In HLA_DQB1 06:04 , HLA_DRB1 03:08 and 11:30. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Thyroid Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Follicular_carcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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