Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
120 263

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 07:02,07:02 07:02,07:02 01:02,05:02 None 06:02,06:02 15:01,13:07
RPKM HLA_DQB1 rpkm 1.5 ; HLA_DQA1 rpkm 0.23 ; HLA_B rpkm 23.01 ; HLA_A rpkm 90.21 ; HLA_C rpkm 10.17 ; HLA_DRB1 rpkm 40.46
Note In HLA_DQA1 01:02 and 05:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Bone Site Subtype Ns
Primary Histology Osteosarcoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity None Tumour Source Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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