Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Undifferentiated_sarcoma, Malignant_fibrous_histiocytoma-Pleomorphic_sarcoma Histology Subtype Pleomorphic, Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lung

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
716 1720

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,23:01 08:01,15:17 07:01,07:01 01:02,03:02 None 06:02,05:01 03:01,15:02
RPKM HLA_DQB1 rpkm 0.12 ; HLA_DRB1 rpkm 0.4 ; HLA_C rpkm 66.79 ; HLA_DQA1 rpkm 0.19 ; HLA_B rpkm 18.98 ; HLA_A rpkm 45.78
Note In HLA_DQB1 06:02 , HLA_DRB1 03:01 and 15:02 , HLA_C 07:01 , HLA_DQA1 01:02 and 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Soft_tissue Site Subtype Fibrous_tissue_and_uncertain_origin
Primary Histology Undifferentiated_sarcoma, Malignant_fibrous_histiocytoma-Pleomorphic_sarcoma Histology Subtype Pleomorphic, Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lung
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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