Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
650 764

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,66:01 58:02,35:01 06:02,16:01 None None 06:13,06:13 15:03,13:26
RPKM HLA_C rpkm 27.52 ; HLA_DRB1 rpkm 2.79 ; HLA_A rpkm 76.99 ; HLA_B rpkm 16.92 ; HLA_DQB1 rpkm 0.06
Note In HLA_DRB1 15:03 , HLA_B 35:01 , HLA_DQB1 06:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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