Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
429 510

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
29:02,29:02 44:03,44:03 16:01,16:01 01:02,03:02 None 05:03,06:04 03:17,14:01
RPKM HLA_DRB1 rpkm 1.68 ; HLA_A rpkm 123.96 ; HLA_DQB1 rpkm 2.76 ; HLA_B rpkm 151.17 ; HLA_C rpkm 172.61 ; HLA_DQA1 rpkm 0.03
Note In HLA_DRB1 03:17 and 14:01 , HLA_DQB1 06:04 , HLA_B 44:03 , HLA_DQA1 01:02 and 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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