Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
440 526

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 35:03,35:03 12:03,12:03 01:02,03:02 None 05:03,03:02 11:01,04:01
RPKM HLA_DQA1 rpkm 0.04 ; HLA_B rpkm 132.35 ; HLA_C rpkm 87.39 ; HLA_DRB1 rpkm 0.03 ; HLA_A rpkm 685.68 ; HLA_DQB1 rpkm 0.1
Note In HLA_DQA1 01:02 and 03:02 , HLA_DRB1 11:01 and 04:01 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Female Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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