Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
448 1068

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,24:02 44:03,51:01 14:03,03:04 None None 06:04,06:04 13:10,15:01
RPKM HLA_C rpkm 133.38 ; HLA_DQB1 rpkm 3.2 ; HLA_B rpkm 128.6 ; HLA_DRB1 rpkm 0.03 ; HLA_A rpkm 259.14
Note In HLA_C 14:03 and 03:04 , HLA_DQB1 06:04 , HLA_B 44:03 , HLA_DRB1 13:10 and 15:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Large_intestine Site Subtype Ns, Colon
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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