Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
436 1059

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
32:01,32:01 27:07,27:07 15:02,15:02 05:02,03:02 None 03:04,03:04 04:05,04:05
RPKM HLA_A rpkm 6.28 ; HLA_B rpkm 15.43 ; HLA_C rpkm 23.28 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.13 ; HLA_DQA1 rpkm 0.1
Note In HLA_A 32:01 , HLA_B 27:07 , HLA_C 15:02 , HLA_DQB1 03:04 , HLA_DRB1 04:05 , HLA_DQA1 05:02 and 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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