Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Lung, Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ductal_carcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Pleura, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
85 93

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
33:03,33:03 44:03,44:03 07:01,07:01 None None 02:02,02:02 07:01,14:05
RPKM HLA_B rpkm 125.91 ; HLA_A rpkm 167.9 ; HLA_C rpkm 210.65 ; HLA_DRB1 rpkm 2.25 ; HLA_DQB1 rpkm 0.09
Note In HLA_B 44:03 , HLA_C 07:01 , HLA_DQB1 02:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Lung, Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Ductal_carcinoma
Gender Male, Unknown Age Not Available
Ethnicity Caucasian Tumour Source Pleura, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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