Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Bronchioloalveolar_adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Nan, Ns

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
111 128

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,11:01 52:01,35:01 12:02,12:02 03:02,05:01 None 06:01,06:01 01:01,15:01
RPKM HLA_C rpkm 57.25 ; HLA_A rpkm 65.13 ; HLA_DQA1 rpkm 0.11 ; HLA_DQB1 rpkm 0.1 ; HLA_DRB1 rpkm 0.1 ; HLA_B rpkm 23.55
Note In HLA_DQA1 03:02 , HLA_DRB1 15:01 , HLA_B 35:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line, Ns HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma, Bronchioloalveolar_adenocarcinoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Nan, Ns
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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