Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
173 337

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01:01,01:01:01 57:01,57:01 06:02,06:02 None 04:01,13:01 05:01,05:01 11:30,13:01
RPKM HLA_C rpkm nan ; HLA_DQB1 rpkm nan ; HLA_B rpkm nan ; HLA_A rpkm 6.35 ; HLA_DRB1 rpkm 0.03 ; HLA_DQB1 rpkm 0.03 ; HLA_C rpkm 120.96 ; HLA_B rpkm 138.48 ; HLA_DPB1 rpkm nan ; HLA_A rpkm nan
Note In HLA_A 24:15 , HLA_DRB1 11:30 and 13:01 , HLA_DQB1 05:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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