Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Hepatocellular_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
180 199

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:06 15:01,15:01 01:02,03:03 None None 03:04,03:04 04:05,11:02
RPKM HLA_B rpkm 30.52 ; HLA_DRB1 rpkm 0.05 ; HLA_C rpkm 41.9 ; HLA_A rpkm 59.61 ; HLA_DQB1 rpkm 0.03
Note In HLA_B 15:01 , HLA_DRB1 04:05 and 11:02 , HLA_A 02:06 , HLA_DQB1 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Hepatocellular_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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