Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Subcutaneous_tissue

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
238 575

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,01:01 57:01,15:01 03:03,06:02 03:02,02:01 None 03:02,03:02 04:04,07:01
RPKM HLA_DQA1 rpkm 133.86 ; HLA_B rpkm 46.26 ; HLA_DRB1 rpkm 223.47 ; HLA_C rpkm 70.44 ; HLA_DQB1 rpkm 49.53 ; HLA_A rpkm 160.32
Note In HLA_DQA1 03:02 , HLA_DRB1 04:04 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Subcutaneous_tissue
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background