Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Lung

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
39 47

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,25:01 08:01,07:02 07:02,07:02 03:02,01:02 None 02:02,02:02 04:05,11:09
RPKM HLA_DRB1 rpkm 0.43 ; HLA_DQA1 rpkm 0.32 ; HLA_A rpkm 54.25 ; HLA_DQB1 rpkm 0.03 ; HLA_C rpkm 99.35 ; HLA_B rpkm 34.61
Note In HLA_DRB1 04:05 , HLA_DQA1 03:02 and 01:02 , HLA_DQB1 02:02 , HLA_C 07:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Female Age None
Ethnicity Caucasian Tumour Source Lung
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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