Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin
Primary Histology Lymphoid_neoplasm Histology Subtype Mycosis_fungoides-Sezary_syndrome
Gender Male Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
95 113

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:02,66:02 18:01,58:01 07:01,07:01 01:02,01:02 None 06:02,06:02 15:03,13:07
RPKM HLA_DRB1 rpkm 164.17 ; HLA_DQA1 rpkm 93.37 ; HLA_A rpkm 334.15 ; HLA_B rpkm 370.05 ; HLA_DQB1 rpkm 86.46 ; HLA_C rpkm 364.35
Note In HLA_DRB1 15:03 , HLA_C 07:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Skin
Primary Histology Lymphoid_neoplasm Histology Subtype Mycosis_fungoides-Sezary_syndrome
Gender Male Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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