Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1041 2666

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,03:01 44:02,35:01 05:01,04:01 03:02,01:02 None 03:04,05:01 04:01,01:01
RPKM HLA_DRB1 rpkm 4.42 ; HLA_C rpkm 34.27 ; HLA_B rpkm 14.1 ; HLA_DQA1 rpkm 0.89 ; HLA_A rpkm 97.62 ; HLA_DQB1 rpkm 0.61
Note In HLA_DRB1 04:01 , HLA_B 35:01 , HLA_DQA1 03:02 and 01:02 , HLA_DQB1 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Metastasis, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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