Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
372 918

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,01:01 39:01,39:01 12:03,12:03 None None None 16:05,16:05
RPKM HLA_A rpkm 372.22 ; HLA_B rpkm 13.51 ; HLA_C rpkm 29.54 ; HLA_DRB1 rpkm 0.32
Note In HLA_DRB1 16:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Skin Site Subtype Ns
Primary Histology Malignant_melanoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Caucasian Tumour Source Ns, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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