Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Hepatocellular_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
759 1911

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
31:01,24:02 51:01,67:02 14:02,14:02 None None 06:01,06:01 15:02,15:02
RPKM HLA_A rpkm 41.28 ; HLA_C rpkm 62.83 ; HLA_DRB1 rpkm 0.17 ; HLA_B rpkm 10.96 ; HLA_DQB1 rpkm 0.03
Note In HLA_DRB1 15:02 , HLA_B 51:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Liver Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Hepatocellular_carcinoma
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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