Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
232 548

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,03:01 08:01,40:01 07:06,03:04 02:01,02:01 None None 15:01,15:01
RPKM HLA_DQA1 rpkm 0.04 ; HLA_C rpkm 211.52 ; HLA_DRB1 rpkm 0.03 ; HLA_B rpkm 54.43 ; HLA_A rpkm 95.23
Note In HLA_C 07:06 , HLA_DRB1 15:01 , HLA_B 40:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Breast Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns, Ductal_carcinoma
Gender Unknown, Female Age Not Available
Ethnicity Caucasian Tumour Source Ns, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background