Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node, Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Chronic_lymphocytic_leukaemia-Small_lymphocytic_lymphoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
188 391

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
68:01,02:01 55:01,07:02 03:03,07:02 05:01,02:01 None 03:01,02:01 11:01,07:01
RPKM HLA_DQB1 rpkm 172.63 ; HLA_DRB1 rpkm 432.57 ; HLA_DQA1 rpkm 626.88 ; HLA_B rpkm 686.06 ; HLA_C rpkm 406.68 ; HLA_A rpkm 575.36
Note In HLA_DQB1 02:01 , HLA_DRB1 11:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Lymph_node, Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Chronic_lymphocytic_leukaemia-Small_lymphocytic_lymphoma
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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