Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Chronic_myeloid_leukaemia, Blast_phase_chronic_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
366 852

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:02 18,40 05:01,03:04 None 04:01,04:02 02:01,03:02 03,04
RPKM HLA_DRB1 rpkm nan ; HLA_C rpkm nan ; HLA_C rpkm 1.84 ; HLA_B rpkm 0.09 ; HLA_DQB1 rpkm nan ; HLA_DPB1 rpkm nan ; HLA_A rpkm nan ; HLA_A rpkm 0.09 ; HLA_B rpkm nan
Note In HLA_A 24:02 and 26:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Chronic_myeloid_leukaemia, Blast_phase_chronic_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Pleura
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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