Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Japanese, Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
321 699

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,26:01 40:06,40:06 08:01,03:03 03:02,04:01 None 05:03,05:03 14:01,09:01
RPKM HLA_B rpkm 20.36 ; HLA_A rpkm 35.53 ; HLA_C rpkm 12.43 ; HLA_DQA1 rpkm 0.1 ; HLA_DRB1 rpkm 1.89 ; HLA_DQB1 rpkm 0.34
Note In HLA_A 26:01 , HLA_C 08:01 , HLA_DQA1 03:02 , HLA_DRB1 14:01 , HLA_DQB1 05:03. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Japanese, Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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