Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_leukaemia, Acute_lymphoblastic_t_cell_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
194 431

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:01,11:01 44:02,35:01 04:01,05:01 None None 05:01,03:02 01:03,11:01
RPKM HLA_DQB1 rpkm 0.03 ; HLA_A rpkm 121.42 ; HLA_DRB1 rpkm 0.2 ; HLA_C rpkm 136.35 ; HLA_B rpkm 113.02
Note In HLA_DQB1 03:02 , HLA_DRB1 01:03 and 11:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Acute_lymphoblastic_leukaemia, Acute_lymphoblastic_t_cell_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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