Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian, African_american Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
219 452

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
30:02,30:02 78:01,53:01 04:01,16:01 01:02,05:02 None 06:11,03:04 11:01,03:17
RPKM HLA_A rpkm 50.94 ; HLA_B rpkm 34.22 ; HLA_DQB1 rpkm 18.38 ; HLA_C rpkm 53.01 ; HLA_DRB1 rpkm 119.0 ; HLA_DQA1 rpkm 0.96
Note In HLA_B 53:01 , HLA_DQB1 06:11 and 03:04 , HLA_DRB1 03:17 , HLA_DQA1 01:02 and 05:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Acute_myeloid_leukaemia
Gender Male Age Not Available
Ethnicity Caucasian, African_american Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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