Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Clear_cell_renal_cell_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
130 145

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,11:01 55:02,51:01 14:02,03:03 03:02,05:02 None 03:02,06:13 15:01,08:02
RPKM HLA_A rpkm 692.44 ; HLA_B rpkm 639.6 ; HLA_DQB1 rpkm 6.03 ; HLA_C rpkm 630.37 ; HLA_DQA1 rpkm 0.07 ; HLA_DRB1 rpkm 23.73
Note In HLA_DQB1 06:13 , HLA_DQA1 03:02 and 05:02 , HLA_DRB1 15:01 and 08:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Kidney Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Clear_cell_renal_cell_carcinoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background