Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Japanese, Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
692 1577

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 51:01,54:01 14:02,01:02 03:02,05:01 None 04:01,03:01 14:03,04:05
RPKM HLA_A rpkm 280.39 ; HLA_B rpkm 132.62 ; HLA_C rpkm 101.73 ; HLA_DQA1 rpkm 32.41 ; HLA_DQB1 rpkm 23.35 ; HLA_DRB1 rpkm 54.75
Note In HLA_DQA1 03:02 , HLA_DRB1 14:03 and 04:05. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age Not Available
Ethnicity Japanese, Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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