Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
216 246

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
26:01,11:01 67:01,40:01 07:02,07:02 05:01,01:02 None 05:02,03:01 12:01,16:02
RPKM HLA_DRB1 rpkm 78.79 ; HLA_A rpkm 60.88 ; HLA_DQB1 rpkm 29.74 ; HLA_C rpkm 163.54 ; HLA_DQA1 rpkm 41.79 ; HLA_B rpkm 99.23
Note In HLA_DRB1 12:01 and 16:02 , HLA_A 26:01 , HLA_DQA1 05:01 , HLA_B 40:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Plasma_cell_myeloma
Gender Female Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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