Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Asian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
397 880

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:01 07:02,54:01 07:02,01:02 03:02,01:01 None 03:02,05:01 01:01,04:06
RPKM HLA_A rpkm 191.73 ; HLA_DQA1 rpkm 29.15 ; HLA_DRB1 rpkm 162.44 ; HLA_B rpkm 51.36 ; HLA_C rpkm 71.28 ; HLA_DQB1 rpkm 23.46
Note In HLA_A 26:01 , HLA_DQA1 03:02 and 01:01 , HLA_DRB1 01:01 and 04:06 , HLA_DQB1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Central_nervous_system Site Subtype Brain
Primary Histology Glioma Histology Subtype Ns
Gender Male Age Not Available
Ethnicity Asian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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