Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity Asian Tumour Source Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
157 177

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 52:01,52:01 12:02,12:02 04:01,01:02 None 06:07,06:07 11:04,04:13
RPKM HLA_B rpkm 12.2 ; HLA_C rpkm 33.87 ; HLA_A rpkm 265.28 ; HLA_DQA1 rpkm 0.07 ; HLA_DQB1 rpkm 0.03 ; HLA_DRB1 rpkm 0.1
Note In HLA_DQA1 01:02 , HLA_DQB1 06:07 , HLA_DRB1 11:04 and 04:13. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity Asian Tumour Source Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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