Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Primary, Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
386 866

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,26:02 52:01,40:02 03:04,07:41 01:02,02:01 None 03:04,03:04 04:74,15:01
RPKM HLA_DQB1 rpkm 0.04 ; HLA_B rpkm 0.14 ; HLA_DRB1 rpkm 0.07 ; HLA_DQA1 rpkm 0.04 ; HLA_A rpkm 29.57 ; HLA_C rpkm 0.14
Note In HLA_DQB1 03:04 , HLA_B 52:01 and 40:02 , HLA_DRB1 15:01 , HLA_DQA1 01:02 , HLA_A 24:02 and 26:02 , HLA_C 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Autonomic_ganglia Site Subtype Ns
Primary Histology Neuroblastoma Histology Subtype Ns
Gender Unknown, Male Age Not Available
Ethnicity Asian Tumour Source Primary, Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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