Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Unknown, Soft_tissue Site Subtype Unknown, Striated_muscle
Primary Histology Unknown, Rhabdomyosarcoma Histology Subtype Unknown, Ns
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Ns, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
484 1107

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
11:01,26:01 40:02,35:01 03:04,03:04 05:02,05:02 None 06:01,06:01 04:04,13:01
RPKM HLA_DQB1 rpkm 0.06 ; HLA_B rpkm 28.28 ; HLA_DQA1 rpkm 0.09 ; HLA_A rpkm 62.73 ; HLA_C rpkm 64.37 ; HLA_DRB1 rpkm 0.09
Note In HLA_DQB1 06:01 , HLA_B 40:02 , HLA_DQA1 05:02 , HLA_C 03:04 , HLA_DRB1 04:04 and 13:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Unknown, Soft_tissue Site Subtype Unknown, Striated_muscle
Primary Histology Unknown, Rhabdomyosarcoma Histology Subtype Unknown, Ns
Gender Unknown, Unknown Age Not Available
Ethnicity Asian Tumour Source Ns, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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