Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
368 415

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,24:02 54:01,52:01 01:02,01:02 03:02,01:02 None 06:01,04:01 15:02,04:05
RPKM HLA_A rpkm 297.42 ; HLA_DRB1 rpkm 63.34 ; HLA_DQA1 rpkm 4.73 ; HLA_C rpkm 127.0 ; HLA_B rpkm 63.51 ; HLA_DQB1 rpkm 35.01
Note In HLA_DRB1 15:02 and 04:05 , HLA_DQA1 03:02 and 01:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Lymphoid_neoplasm Histology Subtype Anaplastic_large_cell_lymphoma
Gender Male Age None
Ethnicity Asian Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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