Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity African_american Tumour Source Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
149 163

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:07,24:07 35:05,35:05 04:01,04:01 04:01,04:01 None 03:04,03:04 12:02,14:46
RPKM HLA_B rpkm 29.07 ; HLA_A rpkm 216.2 ; HLA_DRB1 rpkm 2.05 ; HLA_C rpkm 88.18 ; HLA_DQB1 rpkm 0.78 ; HLA_DQA1 rpkm 0.03
Note In HLA_DRB1 12:02 , HLA_DQB1 03:04. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Pancreas Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Ns
Gender Unknown Age None
Ethnicity African_american Tumour Source Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
Settings

Logo Header


Navbar Header


Sidebar

Background