Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Blast_phase_chronic_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
214 487

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:01,25:01 67:02,18:01 12:03,05:01 None None 06:02,06:02 15:01,14:103
RPKM HLA_A rpkm 34.18 ; HLA_DRB1 rpkm 4.18 ; HLA_C rpkm 28.12 ; HLA_B rpkm 0.87 ; HLA_DQB1 rpkm 0.57
Note In HLA_A 02:01 , HLA_DQB1 06:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Haematopoietic_and_lymphoid_tissue Site Subtype Ns
Primary Histology Haematopoietic_neoplasm Histology Subtype Blast_phase_chronic_myeloid_leukaemia
Gender Female Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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