Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
373 890

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
02:19,24:02 15:01,18:01 03:03,12:03 03:02,01:02 None 05:01,03:02 01:01,04:01
RPKM HLA_B rpkm 44.35 ; HLA_C rpkm 53.68 ; HLA_DQA1 rpkm 0.3 ; HLA_DQB1 rpkm 2.3 ; HLA_DRB1 rpkm 7.19 ; HLA_A rpkm 158.25
Note In HLA_B 15:01 , HLA_DQA1 03:02 and 01:02 , HLA_DQB1 03:02 , HLA_DRB1 04:01 , HLA_A 02:19. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types Not Available
Primary Site Lung Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Large_cell_carcinoma
Gender Male Age Not Available
Ethnicity Caucasian Tumour Source Primary, Nan
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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