Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown Age None
Ethnicity Asian Tumour Source Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
133 164

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
24:02,02:06 52:01,13:01 12:02,03:04 05:02,03:02 None 02:02,03:04 15:01,12:01
RPKM HLA_A rpkm 270.39 ; HLA_B rpkm 161.56 ; HLA_C rpkm 107.65 ; HLA_DQA1 rpkm 0.04 ; HLA_DQB1 rpkm 0.18 ; HLA_DRB1 rpkm 0.07
Note In HLA_A 02:06 , HLA_C 03:04 , HLA_DQA1 05:02 and 03:02 , HLA_DQB1 02:02 and 03:04 , HLA_DRB1 15:01 and 12:01. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Stomach Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Unknown Age None
Ethnicity Asian Tumour Source Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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