Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Lymph_node

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
1698 2138

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,37:01 07:01,06:02 04:01,03:02 None 05:01,05:01 10:04,04:06
RPKM HLA_DQB1 rpkm 3.56 ; HLA_C rpkm 53.74 ; HLA_A rpkm 32.01 ; HLA_DRB1 rpkm 0.41 ; HLA_DQA1 rpkm 0.07 ; HLA_B rpkm 29.49
Note In HLA_C 07:01 , HLA_A 02:01 , HLA_DRB1 04:06 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Lymph_node
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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