Mutant Peptide Lists

Overview

Mutation Count in Gene

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Metastasis

Mutation Source

COSMIC Cell line COSMIC tissue CCLE PubMed

Mutation Information

Total Genes Total Mutant Peptides
2911 6900

Overview

HLA Information

HLA Class I HLA Class II
HLA_A HLA_B HLA_C HLA_DQA1 HLA_DPB1 HLA_DQB1 HLA_DRB1
01:01,02:01 08:01,37:01 07:01,06:02 04:01,03:02 None 05:01,05:01 10:04,04:06
RPKM HLA_DQB1 rpkm 3.56 ; HLA_C rpkm 53.74 ; HLA_A rpkm 32.01 ; HLA_DRB1 rpkm 0.41 ; HLA_DQA1 rpkm 0.07 ; HLA_B rpkm 29.49
Note In HLA_C 07:01 , HLA_A 02:01 , HLA_DRB1 04:06 , HLA_DQA1 03:02. Ambiguity on 4 digit level. Chosen allele had the highest number of reads.

Sample Information

Sample Type Cell-Line HLA Types None
Primary Site Prostate Site Subtype Ns
Primary Histology Carcinoma Histology Subtype Adenocarcinoma
Gender Male Age None
Ethnicity Caucasian Tumour Source Metastasis
CAN-IMMUNE ID Gene Symbol Transcript Accession Mutation AA Mutation CDS Mutation Type Source Database Mutant Peptide Source Map ID
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